mcrpc cohort Search Results


wgs mcrpc cohort a mutation annotation file  (10X Genomics)
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10X Genomics wgs mcrpc cohort a mutation annotation file
(a) Landscape of rearrangements and sequencing metrics across the 10XG <t>WGS</t> <t>mCRPC</t> cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.
Wgs Mcrpc Cohort A Mutation Annotation File, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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(a) Landscape of rearrangements and sequencing metrics across the 10XG WGS mCRPC cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.

Journal: Cell

Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

doi: 10.1016/j.cell.2018.05.036

Figure Lengend Snippet: (a) Landscape of rearrangements and sequencing metrics across the 10XG WGS mCRPC cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.

Article Snippet: Mutation callset and phasing metrics for 10X Genomics WGS mCRPC cohort (A) Mutation annotation file containing final mutation callset ( STAR Methods ).

Techniques: Sequencing, Variant Assay

(a) TDP, CDK12 alteration, and ETS-rearrangement status in 10XG WGS mCRPC cohort.

Journal: Cell

Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

doi: 10.1016/j.cell.2018.05.036

Figure Lengend Snippet: (a) TDP, CDK12 alteration, and ETS-rearrangement status in 10XG WGS mCRPC cohort.

Article Snippet: Mutation callset and phasing metrics for 10X Genomics WGS mCRPC cohort (A) Mutation annotation file containing final mutation callset ( STAR Methods ).

Techniques:

(a) Median of normalized molecule coverage near the AR gene and enhancer in the 10XG WGS mCRPC cohort; bins containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 100 kb.

Journal: Cell

Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

doi: 10.1016/j.cell.2018.05.036

Figure Lengend Snippet: (a) Median of normalized molecule coverage near the AR gene and enhancer in the 10XG WGS mCRPC cohort; bins containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 100 kb.

Article Snippet: Mutation callset and phasing metrics for 10X Genomics WGS mCRPC cohort (A) Mutation annotation file containing final mutation callset ( STAR Methods ).

Techniques:

(a) Median of normalized read coverage near AR gene and enhancer in the ULP-WGS cfDNA mCRPC cohort (maximum tumor fraction per patient used); bin containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 500 kb.

Journal: Cell

Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

doi: 10.1016/j.cell.2018.05.036

Figure Lengend Snippet: (a) Median of normalized read coverage near AR gene and enhancer in the ULP-WGS cfDNA mCRPC cohort (maximum tumor fraction per patient used); bin containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 500 kb.

Article Snippet: Mutation callset and phasing metrics for 10X Genomics WGS mCRPC cohort (A) Mutation annotation file containing final mutation callset ( STAR Methods ).

Techniques: